By Gan Sh.

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1. 1. Why the bins are not to overlap? A. Each entity falls in only one bin if bins do not overlap, and the total of all bin counts equals the total number of entities in this case. If bins do overlap, the principle “one entity – one vote” will be broken. 2. Why the bar heights on the left are greater than those on the right in Fig. 1? A. Because bins on the right are as twice shorter than those on the left; therefore, the numbers of entities falling within them must be smaller. 3. Is it true that when there are only two bins, the divider between them must be the midrange point?

This matrix leads to more reasonable results than other scoring matrices; practitioners of protein alignment have selected this matrix as a standard (see Betts and Russell 2003). We consider BLOSUM62 as a similarity matrix and are interested in finding clusters of amino acids that tend to replace each other and looking at physic and chemical properties explaining the groupings. 1 General Visualization can be a by-product of the model and/or method, or it can be utilized by itself. The concept of visualization usually relates to the human cognitive 22 1 Introduction: What Is Core abilities, which are not yet well understood.

According to this principle, to visualize data, one needs to specify first a “ground” image, such as a map or grid or coordinate plane, which is supposed to be well known to the user. Visualization, as a computational device, can be defined as mapping data to the ground image in such a way that the analyzed properties of the data are reflected in properties of the image. Of the goals considered, integration of data will be of a priority since no temporal aspect is considered in this text. Fig. 4 Summary This chapter introduces four problems in data analysis as related to either summarization or correlation, in either quantitative or categorical way.